I Introduction

1 Workshop Info

Welcome to the YEAR WORKSHOP Canadian Bioinformatics Workshop webpage!

1.1 Schedule

Time (EDT) Day 1 Time (EDT) Day 2
8:30 Arrivals & Check-in 8:30 Arrivals
9:00 Welcome (Nia Hughes) 9:00 Day 1 review Linear mixed models and evaluation (Shraddha Pai)
9:30 Exploratory data analysis and introducing clustering (Shraddha Pai) 10:00 Break (30min)
10:30 Break (30min) 10:30 Short linear model exercise (Shraddha Pai)
11:00 Exploratory data analysis and clustering project (Shraddha Pai) 12:30 Class photo + Lunch (1h)
13:00 Lunch (1h) 13:30 Bioconductor for differential expression (Shraddha Pai)
14:00 Dimensionality reduction (Delaram Pouyabahar) 14:30 Break (30min)
15:00 Break (30min) 15:00 Short differential expression exercise (Shraddha Pai)
15:30 Short dimensionality reduction and clustering project (Delaram Pouyabahar) 17:00 Survey & Closing Remarks
17:30 Finished 17:30 Finished

2 Meet Your Faculty

3 Data and Compute Setup

3.0.0.1 Course data downloads

Coming soon!

3.0.0.2 Compute setup

Coming soon!

II Modules

4 Module 1

4.1 Lecture

4.2 Lab

5 Module 2

5.1 Lecture

5.2 Lab

6 Module 3

6.1 Lecture

6.2 Lab

7 Module 4

7.1 Lecture

7.2 Lab